Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Gm14726-201ENSMUST00000120623 896 ntBASIC18.2■□□□□ 0.5
Cps1Q8C196 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC18.2■□□□□ 0.5
Cps1Q8C196 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cps1Q8C196 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cps1Q8C196 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC18.19■□□□□ 0.5
Cps1Q8C196 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Gm24990-201ENSMUST00000157406 323 ntBASIC18.19■□□□□ 0.5
Cps1Q8C196 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.19■□□□□ 0.5
Cps1Q8C196 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cps1Q8C196 Nsd1-205ENSMUST00000224693 852 ntBASIC18.19■□□□□ 0.5
Cps1Q8C196 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.19■□□□□ 0.5
Cps1Q8C196 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Cps1Q8C196 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.19■□□□□ 0.5
Cps1Q8C196 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cps1Q8C196 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm13665-201ENSMUST00000120830 528 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm25732-201ENSMUST00000175168 60 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm5869-201ENSMUST00000200248 1257 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 CT025533.2-201ENSMUST00000228715 1248 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 AC167669.2-201ENSMUST00000224417 1620 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm14704-201ENSMUST00000120300 874 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 Gm6458-201ENSMUST00000211573 635 ntBASIC18.18■□□□□ 0.5
Cps1Q8C196 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18.18■□□□□ 0.5
Cps1Q8C196 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cps1Q8C196 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm23270-201ENSMUST00000104055 131 ntBASIC18.17■□□□□ 0.5
Cps1Q8C196 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm8885-201ENSMUST00000189382 598 ntBASIC18.17■□□□□ 0.5
Cps1Q8C196 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.17■□□□□ 0.5
Cps1Q8C196 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cps1Q8C196 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cps1Q8C196 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cps1Q8C196 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cps1Q8C196 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cps1Q8C196 Gm43289-201ENSMUST00000200537 1475 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms