Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.15□□□□□ -0.14
Chmp2bQ8BJF9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Chmp2bQ8BJF9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2bQ8BJF9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gm13015-201ENSMUST00000118674 204 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 AA619741-201ENSMUST00000195095 646 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms