Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc40Q8BI79 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc40Q8BI79 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm18766-201ENSMUST00000189811 808 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm5312-201ENSMUST00000203728 547 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Grk6-205ENSMUST00000224653 2976 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc40Q8BI79 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 AA543401-201ENSMUST00000164248 1269 ntBASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm27631-201ENSMUST00000184163 466 ntBASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm29541-201ENSMUST00000191351 678 ntBASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc40Q8BI79 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms