Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.07■□□□□ 0
Snd1Q78PY7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.07■□□□□ 0
Snd1Q78PY7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Snd1Q78PY7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Snd1Q78PY7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Snd1Q78PY7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snd1Q78PY7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Gm6973-201ENSMUST00000117080 721 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Gm15483-201ENSMUST00000120338 456 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Gm11745-201ENSMUST00000121669 448 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.06■□□□□ 0
Snd1Q78PY7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Snd1Q78PY7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snd1Q78PY7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ 0
Snd1Q78PY7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.05■□□□□ 0
Snd1Q78PY7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.05■□□□□ 0
Snd1Q78PY7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.05■□□□□ 0
Snd1Q78PY7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Snd1Q78PY7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.05■□□□□ 0
Snd1Q78PY7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Snd1Q78PY7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Snd1Q78PY7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Snd1Q78PY7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Snd1Q78PY7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.05■□□□□ -0
Snd1Q78PY7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.05■□□□□ -0
Snd1Q78PY7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.05■□□□□ -0
Snd1Q78PY7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.05■□□□□ -0
Snd1Q78PY7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Snd1Q78PY7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Snd1Q78PY7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Snd1Q78PY7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.04■□□□□ -0
Snd1Q78PY7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Snd1Q78PY7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Snd1Q78PY7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.04■□□□□ -0
Snd1Q78PY7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Snd1Q78PY7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms