Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chd4Q6PDQ2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm13297-201ENSMUST00000120205 934 ntBASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm24548-201ENSMUST00000158650 108 ntBASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Gm43273-201ENSMUST00000199649 2594 ntBASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chd4Q6PDQ2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chd4Q6PDQ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Gm15370-201ENSMUST00000117158 253 ntBASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms