Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm5187-201ENSMUST00000117317 991 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm16177-201ENSMUST00000120728 718 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm24196-201ENSMUST00000179161 110 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm8598-201ENSMUST00000221184 836 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.45■□□□□ 0.38
Clcn1Q64347 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Clcn1Q64347 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn1Q64347 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Clcn1Q64347 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcn1Q64347 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Clcn1Q64347 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.44■□□□□ 0.38
Clcn1Q64347 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.44■□□□□ 0.38
Clcn1Q64347 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.44■□□□□ 0.38
Clcn1Q64347 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.44■□□□□ 0.38
Clcn1Q64347 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clcn1Q64347 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcn1Q64347 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn1Q64347 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gm22331-201ENSMUST00000158066 136 ntBASIC17.43■□□□□ 0.38
Clcn1Q64347 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.43■□□□□ 0.38
Clcn1Q64347 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.43■□□□□ 0.38
Clcn1Q64347 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn1Q64347 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.43■□□□□ 0.38
Clcn1Q64347 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn1Q64347 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn1Q64347 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms