Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim27Q62158 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim27Q62158 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.94■□□□□ 0.3
Trim27Q62158 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim27Q62158 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim27Q62158 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim27Q62158 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim27Q62158 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim27Q62158 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm24694-201ENSMUST00000180054 110 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 Gm27663-201ENSMUST00000184839 110 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm17795-201ENSMUST00000214505 757 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm20445-201ENSMUST00000061905 565 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.93■□□□□ 0.3
Trim27Q62158 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim27Q62158 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim27Q62158 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim27Q62158 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Gm22189-201ENSMUST00000103822 86 ntBASIC16.92■□□□□ 0.3
Trim27Q62158 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.92■□□□□ 0.3
Trim27Q62158 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.92■□□□□ 0.3
Trim27Q62158 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim27Q62158 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.92■□□□□ 0.3
Trim27Q62158 Syt7-204ENSMUST00000223586 1344 ntBASIC16.92■□□□□ 0.3
Trim27Q62158 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.92■□□□□ 0.3
Trim27Q62158 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim27Q62158 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.91■□□□□ 0.3
Trim27Q62158 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Trim27Q62158 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim27Q62158 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Trim27Q62158 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.91■□□□□ 0.3
Trim27Q62158 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim27Q62158 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim27Q62158 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.91■□□□□ 0.3
Trim27Q62158 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim27Q62158 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim27Q62158 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms