Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm19459-201ENSMUST00000176240 835 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm9211-201ENSMUST00000182882 975 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm5781-201ENSMUST00000219792 443 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm8712-201ENSMUST00000221090 701 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm37905-201ENSMUST00000195310 341 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.32□□□□□ -0.28
Col12a1Q60847 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.32□□□□□ -0.28
Col12a1Q60847 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm9555-201ENSMUST00000200908 583 ntBASIC13.31□□□□□ -0.28
Col12a1Q60847 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.31□□□□□ -0.28
Col12a1Q60847 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Col12a1Q60847 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.31□□□□□ -0.28
Col12a1Q60847 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm4768-201ENSMUST00000206199 686 ntBASIC13.31□□□□□ -0.28
Col12a1Q60847 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.31□□□□□ -0.28
Col12a1Q60847 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.31□□□□□ -0.28
Col12a1Q60847 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col12a1Q60847 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm12403-201ENSMUST00000121384 959 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Gm38144-201ENSMUST00000192790 465 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col12a1Q60847 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.3□□□□□ -0.28
Col12a1Q60847 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.3□□□□□ -0.28
Col12a1Q60847 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms