Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Trim43bP86448 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 Gm15483-201ENSMUST00000120338 456 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Trim43bP86448 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim43bP86448 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim43bP86448 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim43bP86448 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim43bP86448 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim43bP86448 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trim43bP86448 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim43bP86448 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Trim43bP86448 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim43bP86448 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.21□□□□□ -0.13
Trim43bP86448 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim43bP86448 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim43bP86448 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.14
Trim43bP86448 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim43bP86448 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim43bP86448 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.2□□□□□ -0.14
Trim43bP86448 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43bP86448 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.2□□□□□ -0.14
Trim43bP86448 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43bP86448 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43bP86448 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms