Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SgcbP82349 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
SgcbP82349 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SgcbP82349 Gm8927-201ENSMUST00000181978 981 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.32□□□□□ -0.44
SgcbP82349 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Gm3222-201ENSMUST00000071282 990 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.32□□□□□ -0.44
SgcbP82349 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SgcbP82349 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SgcbP82349 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.32□□□□□ -0.44
SgcbP82349 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
SgcbP82349 Gm13385-201ENSMUST00000121089 220 ntBASIC12.31□□□□□ -0.44
SgcbP82349 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.31□□□□□ -0.44
SgcbP82349 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SgcbP82349 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Gm21854-201ENSMUST00000179901 471 ntBASIC12.31□□□□□ -0.44
SgcbP82349 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.31□□□□□ -0.44
SgcbP82349 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.31□□□□□ -0.44
SgcbP82349 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcbP82349 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.31□□□□□ -0.44
SgcbP82349 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcbP82349 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SgcbP82349 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SgcbP82349 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Gm6912-201ENSMUST00000117218 544 ntBASIC12.3□□□□□ -0.44
SgcbP82349 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SgcbP82349 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.3□□□□□ -0.44
SgcbP82349 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Gm42612-201ENSMUST00000197986 623 ntBASIC12.3□□□□□ -0.44
SgcbP82349 Gm43170-201ENSMUST00000199827 612 ntBASIC12.3□□□□□ -0.44
SgcbP82349 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.3□□□□□ -0.44
SgcbP82349 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.3□□□□□ -0.44
SgcbP82349 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.3□□□□□ -0.44
SgcbP82349 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcbP82349 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms