Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps33bP59016 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps33bP59016 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Vps33bP59016 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps33bP59016 Gm14130-201ENSMUST00000118417 987 ntBASIC17.19■□□□□ 0.34
Vps33bP59016 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.19■□□□□ 0.34
Vps33bP59016 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps33bP59016 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.19■□□□□ 0.34
Vps33bP59016 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC17.19■□□□□ 0.34
Vps33bP59016 Gstp-ps-201ENSMUST00000195526 631 ntBASIC17.19■□□□□ 0.34
Vps33bP59016 Gm43947-201ENSMUST00000203019 959 ntBASIC17.19■□□□□ 0.34
Vps33bP59016 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps33bP59016 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.19■□□□□ 0.34
Vps33bP59016 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.19■□□□□ 0.34
Vps33bP59016 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps33bP59016 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.18■□□□□ 0.34
Vps33bP59016 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.18■□□□□ 0.34
Vps33bP59016 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps33bP59016 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps33bP59016 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Gm13570-201ENSMUST00000140763 309 ntBASIC17.18■□□□□ 0.34
Vps33bP59016 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC17.18■□□□□ 0.34
Vps33bP59016 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Vps33bP59016 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps33bP59016 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.18■□□□□ 0.34
Vps33bP59016 Gm44967-201ENSMUST00000207047 631 ntBASIC17.18■□□□□ 0.34
Vps33bP59016 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.18■□□□□ 0.34
Vps33bP59016 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps33bP59016 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.17■□□□□ 0.34
Vps33bP59016 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.17■□□□□ 0.34
Vps33bP59016 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Gm29787-201ENSMUST00000222129 849 ntBASIC17.17■□□□□ 0.34
Vps33bP59016 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.17■□□□□ 0.34
Vps33bP59016 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.17■□□□□ 0.34
Vps33bP59016 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vps33bP59016 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33bP59016 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps33bP59016 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33bP59016 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps33bP59016 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms