Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tubgcp3P58854 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm27618-201ENSMUST00000183671 60 ntBASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm38294-201ENSMUST00000192831 381 ntBASIC14.11□□□□□ -0.15
Tubgcp3P58854 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.11□□□□□ -0.15
Tubgcp3P58854 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.11□□□□□ -0.15
Tubgcp3P58854 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubgcp3P58854 Matn2-206ENSMUST00000228570 2798 ntBASIC14.11□□□□□ -0.15
Tubgcp3P58854 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Gm15460-201ENSMUST00000118147 391 ntBASIC14.1□□□□□ -0.15
Tubgcp3P58854 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Gm9229-201ENSMUST00000222777 126 ntBASIC14.1□□□□□ -0.15
Tubgcp3P58854 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.1□□□□□ -0.15
Tubgcp3P58854 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tubgcp3P58854 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm13616-201ENSMUST00000120600 222 ntBASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.09□□□□□ -0.15
Tubgcp3P58854 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.09□□□□□ -0.15
Tubgcp3P58854 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubgcp3P58854 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms