Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sox3P53784 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Gm15678-201ENSMUST00000117573 960 ntBASIC13.23□□□□□ -0.29
Sox3P53784 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sox3P53784 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.23□□□□□ -0.29
Sox3P53784 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.23□□□□□ -0.29
Sox3P53784 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.23□□□□□ -0.29
Sox3P53784 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Gm9229-201ENSMUST00000222777 126 ntBASIC13.23□□□□□ -0.29
Sox3P53784 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sox3P53784 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sox3P53784 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox3P53784 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Sox3P53784 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Gm13226-201ENSMUST00000117838 404 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.22□□□□□ -0.29
Sox3P53784 Gm8062-201ENSMUST00000139696 444 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.22□□□□□ -0.29
Sox3P53784 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sox3P53784 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.22□□□□□ -0.29
Sox3P53784 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox3P53784 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sox3P53784 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.22□□□□□ -0.29
Sox3P53784 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sox3P53784 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox3P53784 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox3P53784 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms