Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.47□□□□□ -0.09
Rfx2P48379 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.47□□□□□ -0.09
Rfx2P48379 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.46□□□□□ -0.09
Rfx2P48379 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.46□□□□□ -0.09
Rfx2P48379 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.46□□□□□ -0.09
Rfx2P48379 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.46□□□□□ -0.09
Rfx2P48379 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.46□□□□□ -0.09
Rfx2P48379 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.46□□□□□ -0.09
Rfx2P48379 Gm9908-201ENSMUST00000211534 448 ntBASIC14.46□□□□□ -0.09
Rfx2P48379 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Rfx2P48379 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Rfx2P48379 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rfx2P48379 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx2P48379 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rfx2P48379 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Rfx2P48379 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.45□□□□□ -0.1
Rfx2P48379 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx2P48379 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rfx2P48379 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.45□□□□□ -0.1
Rfx2P48379 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.45□□□□□ -0.1
Rfx2P48379 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rfx2P48379 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.45□□□□□ -0.1
Rfx2P48379 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.44□□□□□ -0.1
Rfx2P48379 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Rfx2P48379 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Rfx2P48379 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rfx2P48379 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.44□□□□□ -0.1
Rfx2P48379 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rfx2P48379 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Rfx2P48379 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rfx2P48379 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms