Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Gm8927-201ENSMUST00000181978 981 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Gm3222-201ENSMUST00000071282 990 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-6P43688 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.05□□□□□ -0.32
Nkx2-6P43688 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.04□□□□□ -0.32
Nkx2-6P43688 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gm4984-201ENSMUST00000115987 360 ntBASIC13.04□□□□□ -0.32
Nkx2-6P43688 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gm7287-201ENSMUST00000205267 602 ntBASIC13.04□□□□□ -0.32
Nkx2-6P43688 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.04□□□□□ -0.32
Nkx2-6P43688 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-6P43688 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gm11814-201ENSMUST00000119515 929 ntBASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gm15429-201ENSMUST00000151268 798 ntBASIC13.03□□□□□ -0.32
Nkx2-6P43688 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx2-6P43688 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-6P43688 Gm9899-201ENSMUST00000065519 555 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms