Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Fen1P39749 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Gm9727-201ENSMUST00000161387 555 ntBASIC13.9□□□□□ -0.18
Fen1P39749 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.9□□□□□ -0.18
Fen1P39749 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.9□□□□□ -0.18
Fen1P39749 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.9□□□□□ -0.18
Fen1P39749 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Fen1P39749 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Fen1P39749 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.89□□□□□ -0.19
Fen1P39749 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Gm14494-201ENSMUST00000118786 435 ntBASIC13.89□□□□□ -0.19
Fen1P39749 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Fen1P39749 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Gm2756-201ENSMUST00000195851 400 ntBASIC13.89□□□□□ -0.19
Fen1P39749 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.89□□□□□ -0.19
Fen1P39749 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.89□□□□□ -0.19
Fen1P39749 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.89□□□□□ -0.19
Fen1P39749 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Fen1P39749 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.88□□□□□ -0.19
Fen1P39749 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Fen1P39749 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Fen1P39749 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Fen1P39749 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Fen1P39749 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Fen1P39749 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms