Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.12□□□□□ -0.47
Upk2P38575 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Upk2P38575 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Upk2P38575 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Upk2P38575 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Upk2P38575 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Upk2P38575 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Upk2P38575 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk2P38575 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Upk2P38575 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.11□□□□□ -0.47
Upk2P38575 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk2P38575 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk2P38575 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.11□□□□□ -0.47
Upk2P38575 Gm24420-201ENSMUST00000176676 59 ntBASIC12.11□□□□□ -0.47
Upk2P38575 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.11□□□□□ -0.47
Upk2P38575 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.11□□□□□ -0.47
Upk2P38575 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk2P38575 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Upk2P38575 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Upk2P38575 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.1□□□□□ -0.47
Upk2P38575 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.1□□□□□ -0.47
Upk2P38575 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.1□□□□□ -0.47
Upk2P38575 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.1□□□□□ -0.47
Upk2P38575 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Gm27306-201ENSMUST00000183970 107 ntBASIC12.1□□□□□ -0.47
Upk2P38575 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk2P38575 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.1□□□□□ -0.47
Upk2P38575 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Upk2P38575 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.1□□□□□ -0.47
Upk2P38575 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Upk2P38575 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Upk2P38575 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Upk2P38575 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms