Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm25911-201ENSMUST00000157621 56 ntBASIC15.08■□□□□ 0
Sox5P35710 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm18766-201ENSMUST00000189811 808 ntBASIC15.08■□□□□ 0
Sox5P35710 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.08■□□□□ 0
Sox5P35710 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.08■□□□□ 0
Sox5P35710 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sox5P35710 Mir497b-201ENSMUST00000093601 125 ntBASIC15.08■□□□□ 0
Sox5P35710 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Sox5P35710 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.08■□□□□ 0
Sox5P35710 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Sox5P35710 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.07■□□□□ 0
Sox5P35710 Gm5566-201ENSMUST00000116118 459 ntBASIC15.07■□□□□ 0
Sox5P35710 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Gm27494-201ENSMUST00000184735 189 ntBASIC15.07■□□□□ 0
Sox5P35710 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.07■□□□□ 0
Sox5P35710 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.07■□□□□ 0
Sox5P35710 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.07■□□□□ 0
Sox5P35710 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Sox5P35710 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox5P35710 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox5P35710 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Sox5P35710 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.06■□□□□ 0
Sox5P35710 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Gm9719-201ENSMUST00000162765 543 ntBASIC15.06■□□□□ 0
Sox5P35710 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.06■□□□□ 0
Sox5P35710 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.06■□□□□ 0
Sox5P35710 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox5P35710 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Sox5P35710 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox5P35710 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Sox5P35710 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox5P35710 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox5P35710 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sox5P35710 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox5P35710 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms