Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm16215-201ENSMUST00000161990 637 ntBASIC12.77□□□□□ -0.37
Foxa1P35582 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.77□□□□□ -0.37
Foxa1P35582 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.77□□□□□ -0.37
Foxa1P35582 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Foxa1P35582 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.77□□□□□ -0.37
Foxa1P35582 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Foxa1P35582 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.77□□□□□ -0.37
Foxa1P35582 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Foxa1P35582 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
Foxa1P35582 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Foxa1P35582 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Foxa1P35582 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Foxa1P35582 Gm21854-201ENSMUST00000179901 471 ntBASIC12.76□□□□□ -0.37
Foxa1P35582 Gm17795-201ENSMUST00000214505 757 ntBASIC12.76□□□□□ -0.37
Foxa1P35582 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.76□□□□□ -0.37
Foxa1P35582 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.76□□□□□ -0.37
Foxa1P35582 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Foxa1P35582 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Foxa1P35582 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Foxa1P35582 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.75□□□□□ -0.37
Foxa1P35582 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Gm24420-201ENSMUST00000176676 59 ntBASIC12.75□□□□□ -0.37
Foxa1P35582 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.75□□□□□ -0.37
Foxa1P35582 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Foxa1P35582 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Gm9797-201ENSMUST00000052902 613 ntBASIC12.75□□□□□ -0.37
Foxa1P35582 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Foxa1P35582 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Foxa1P35582 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Foxa1P35582 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Foxa1P35582 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Foxa1P35582 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms