Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Gm44719-201ENSMUST00000206404 149 ntBASIC13.74□□□□□ -0.21
Nckap1P28660 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Mir497b-201ENSMUST00000093601 125 ntBASIC13.74□□□□□ -0.21
Nckap1P28660 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.74□□□□□ -0.21
Nckap1P28660 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nckap1P28660 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Nckap1P28660 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nckap1P28660 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nckap1P28660 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.73□□□□□ -0.21
Nckap1P28660 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
Nckap1P28660 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nckap1P28660 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.73□□□□□ -0.21
Nckap1P28660 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Nckap1P28660 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nckap1P28660 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.73□□□□□ -0.21
Nckap1P28660 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nckap1P28660 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Nckap1P28660 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nckap1P28660 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nckap1P28660 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.72□□□□□ -0.21
Nckap1P28660 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.72□□□□□ -0.21
Nckap1P28660 Gm26464-201ENSMUST00000157094 305 ntBASIC13.72□□□□□ -0.21
Nckap1P28660 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nckap1P28660 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Gm27839-201ENSMUST00000184242 106 ntBASIC13.72□□□□□ -0.21
Nckap1P28660 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.72□□□□□ -0.21
Nckap1P28660 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Nckap1P28660 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.72□□□□□ -0.21
Nckap1P28660 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.72□□□□□ -0.21
Nckap1P28660 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nckap1P28660 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nckap1P28660 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nckap1P28660 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Nckap1P28660 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Nckap1P28660 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.71□□□□□ -0.21
Nckap1P28660 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nckap1P28660 Gm12928-201ENSMUST00000117115 573 ntBASIC13.71□□□□□ -0.21
Nckap1P28660 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.71□□□□□ -0.21
Nckap1P28660 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms