Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pde6bP23440 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pde6bP23440 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pde6bP23440 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pde6bP23440 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pde6bP23440 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Gm15240-201ENSMUST00000118156 720 ntBASIC15.08■□□□□ 0
Pde6bP23440 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.08■□□□□ 0
Pde6bP23440 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pde6bP23440 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.08■□□□□ 0
Pde6bP23440 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Pde6bP23440 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6bP23440 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.08■□□□□ 0
Pde6bP23440 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.07■□□□□ 0
Pde6bP23440 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pde6bP23440 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pde6bP23440 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pde6bP23440 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.07■□□□□ 0
Pde6bP23440 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.07■□□□□ 0
Pde6bP23440 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.07■□□□□ 0
Pde6bP23440 Gm17794-201ENSMUST00000220252 955 ntBASIC15.07■□□□□ 0
Pde6bP23440 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pde6bP23440 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.07■□□□□ 0
Pde6bP23440 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.07■□□□□ 0
Pde6bP23440 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pde6bP23440 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pde6bP23440 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6bP23440 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pde6bP23440 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pde6bP23440 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.06■□□□□ 0
Pde6bP23440 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pde6bP23440 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.06■□□□□ 0
Pde6bP23440 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pde6bP23440 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.06■□□□□ 0
Pde6bP23440 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6bP23440 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Pde6bP23440 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.05■□□□□ 0
Pde6bP23440 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6bP23440 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6bP23440 Mir1894-201ENSMUST00000122802 81 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms