Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm43452-201ENSMUST00000201873 991 ntBASIC10.81□□□□□ -0.68
Hoxd3P09027 Gm45071-201ENSMUST00000205353 571 ntBASIC10.81□□□□□ -0.68
Hoxd3P09027 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Gm45166-201ENSMUST00000209073 683 ntBASIC10.81□□□□□ -0.68
Hoxd3P09027 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Gm45610-201ENSMUST00000209227 784 ntBASIC10.81□□□□□ -0.68
Hoxd3P09027 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxd3P09027 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxd3P09027 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm37965-201ENSMUST00000195304 1362 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm37917-201ENSMUST00000194711 392 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm8515-201ENSMUST00000194852 576 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm43084-201ENSMUST00000200696 947 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm19220-201ENSMUST00000222682 803 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.8□□□□□ -0.68
Hoxd3P09027 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hoxd3P09027 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxd3P09027 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Hoxd3P09027 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Hoxd3P09027 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms