Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.05□□□□□ -0.32
ApoeP08226 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ApoeP08226 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.05□□□□□ -0.32
ApoeP08226 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.05□□□□□ -0.32
ApoeP08226 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
ApoeP08226 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.05□□□□□ -0.32
ApoeP08226 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ApoeP08226 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ApoeP08226 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.04□□□□□ -0.32
ApoeP08226 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ApoeP08226 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.04□□□□□ -0.32
ApoeP08226 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ApoeP08226 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.04□□□□□ -0.32
ApoeP08226 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.04□□□□□ -0.32
ApoeP08226 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.04□□□□□ -0.32
ApoeP08226 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ApoeP08226 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.04□□□□□ -0.32
ApoeP08226 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ApoeP08226 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ApoeP08226 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ApoeP08226 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ApoeP08226 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms