Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
Egr1P08046 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.67□□□□□ -0.38
Egr1P08046 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
Egr1P08046 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Egr1P08046 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Egr1P08046 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.66□□□□□ -0.38
Egr1P08046 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm23200-201ENSMUST00000104379 132 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.66□□□□□ -0.38
Egr1P08046 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.66□□□□□ -0.38
Egr1P08046 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Gm44262-201ENSMUST00000204969 372 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Egr1P08046 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Egr1P08046 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.66□□□□□ -0.38
Egr1P08046 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Egr1P08046 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Egr1P08046 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Egr1P08046 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Egr1P08046 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Gm23270-201ENSMUST00000104055 131 ntBASIC12.65□□□□□ -0.38
Egr1P08046 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.65□□□□□ -0.38
Egr1P08046 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Egr1P08046 Gm14350-201ENSMUST00000116642 640 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Gm13611-201ENSMUST00000118269 318 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Gm15276-201ENSMUST00000145953 498 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Egr1P08046 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Egr1P08046 Gm26956-201ENSMUST00000182176 986 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.65□□□□□ -0.38
Egr1P08046 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Egr1P08046 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.65□□□□□ -0.38
Egr1P08046 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Gm16372-201ENSMUST00000073088 450 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Egr1P08046 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.65□□□□□ -0.38
Egr1P08046 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Egr1P08046 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.65□□□□□ -0.38
Egr1P08046 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Egr1P08046 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Egr1P08046 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Egr1P08046 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Egr1P08046 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Egr1P08046 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Egr1P08046 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Egr1P08046 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Egr1P08046 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Egr1P08046 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms