Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col4a1P02463 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.65■□□□□ 0.26
Col4a1P02463 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a1P02463 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col4a1P02463 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col4a1P02463 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.64■□□□□ 0.26
Col4a1P02463 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Col4a1P02463 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.64■□□□□ 0.25
Col4a1P02463 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a1P02463 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.64■□□□□ 0.25
Col4a1P02463 Gm9368-201ENSMUST00000219348 831 ntBASIC16.64■□□□□ 0.25
Col4a1P02463 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Col4a1P02463 Gm16372-201ENSMUST00000073088 450 ntBASIC16.64■□□□□ 0.25
Col4a1P02463 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Col4a1P02463 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col4a1P02463 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a1P02463 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col4a1P02463 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.63■□□□□ 0.25
Col4a1P02463 Gm10608-202ENSMUST00000213924 676 ntBASIC16.63■□□□□ 0.25
Col4a1P02463 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col4a1P02463 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col4a1P02463 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col4a1P02463 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a1P02463 Gm12241-201ENSMUST00000118330 726 ntBASIC16.62■□□□□ 0.25
Col4a1P02463 Gm37042-201ENSMUST00000193816 581 ntBASIC16.62■□□□□ 0.25
Col4a1P02463 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.62■□□□□ 0.25
Col4a1P02463 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Col4a1P02463 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a1P02463 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col4a1P02463 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Col4a1P02463 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.62■□□□□ 0.25
Col4a1P02463 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a1P02463 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col4a1P02463 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col4a1P02463 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.61■□□□□ 0.25
Col4a1P02463 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.61■□□□□ 0.25
Col4a1P02463 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col4a1P02463 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms