Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
IghmP01872 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
IghmP01872 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.93□□□□□ -0.34
IghmP01872 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.93□□□□□ -0.34
IghmP01872 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Gm8410-201ENSMUST00000117225 605 ntBASIC12.93□□□□□ -0.34
IghmP01872 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.93□□□□□ -0.34
IghmP01872 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.93□□□□□ -0.34
IghmP01872 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.93□□□□□ -0.34
IghmP01872 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
IghmP01872 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.93□□□□□ -0.34
IghmP01872 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.93□□□□□ -0.34
IghmP01872 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.93□□□□□ -0.34
IghmP01872 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
IghmP01872 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.93□□□□□ -0.34
IghmP01872 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
IghmP01872 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
IghmP01872 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.92□□□□□ -0.34
IghmP01872 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.92□□□□□ -0.34
IghmP01872 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
IghmP01872 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.92□□□□□ -0.34
IghmP01872 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.92□□□□□ -0.34
IghmP01872 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.92□□□□□ -0.34
IghmP01872 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.92□□□□□ -0.34
IghmP01872 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.92□□□□□ -0.34
IghmP01872 Gm13385-201ENSMUST00000121089 220 ntBASIC12.92□□□□□ -0.34
IghmP01872 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
IghmP01872 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.92□□□□□ -0.34
IghmP01872 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
IghmP01872 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
IghmP01872 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.92□□□□□ -0.34
IghmP01872 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.92□□□□□ -0.34
IghmP01872 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.92□□□□□ -0.34
IghmP01872 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
IghmP01872 Gm46209-201ENSMUST00000217912 553 ntBASIC12.92□□□□□ -0.34
IghmP01872 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Gm8396-201ENSMUST00000057361 823 ntBASIC12.92□□□□□ -0.34
IghmP01872 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
IghmP01872 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
IghmP01872 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
IghmP01872 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
IghmP01872 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
IghmP01872 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.91□□□□□ -0.34
IghmP01872 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.91□□□□□ -0.34
IghmP01872 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.91□□□□□ -0.34
IghmP01872 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
IghmP01872 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
IghmP01872 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.91□□□□□ -0.34
IghmP01872 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms