Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NgfP01139 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NgfP01139 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NgfP01139 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.12□□□□□ -0.47
NgfP01139 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
NgfP01139 Mir1247-201ENSMUST00000116706 82 ntBASIC12.12□□□□□ -0.47
NgfP01139 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.12□□□□□ -0.47
NgfP01139 Gm27572-201ENSMUST00000183702 255 ntBASIC12.12□□□□□ -0.47
NgfP01139 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.12□□□□□ -0.47
NgfP01139 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.12□□□□□ -0.47
NgfP01139 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.12□□□□□ -0.47
NgfP01139 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.12□□□□□ -0.47
NgfP01139 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.12□□□□□ -0.47
NgfP01139 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.12□□□□□ -0.47
NgfP01139 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NgfP01139 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.11□□□□□ -0.47
NgfP01139 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.11□□□□□ -0.47
NgfP01139 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.11□□□□□ -0.47
NgfP01139 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
NgfP01139 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.11□□□□□ -0.47
NgfP01139 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Gm1335-201ENSMUST00000121653 386 ntBASIC12.11□□□□□ -0.47
NgfP01139 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.11□□□□□ -0.47
NgfP01139 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.11□□□□□ -0.47
NgfP01139 Gm27682-201ENSMUST00000183930 110 ntBASIC12.11□□□□□ -0.47
NgfP01139 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.11□□□□□ -0.47
NgfP01139 Gm18054-201ENSMUST00000207539 555 ntBASIC12.11□□□□□ -0.47
NgfP01139 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.11□□□□□ -0.47
NgfP01139 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NgfP01139 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.1□□□□□ -0.47
NgfP01139 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
NgfP01139 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NgfP01139 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms