Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.24□□□□□ -0.13
CopeO89079 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.24□□□□□ -0.13
CopeO89079 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CopeO89079 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CopeO89079 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CopeO89079 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.24□□□□□ -0.13
CopeO89079 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.23□□□□□ -0.13
CopeO89079 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CopeO89079 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Mir3113-201ENSMUST00000175478 76 ntBASIC14.23□□□□□ -0.13
CopeO89079 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
CopeO89079 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.23□□□□□ -0.13
CopeO89079 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CopeO89079 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CopeO89079 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CopeO89079 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CopeO89079 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CopeO89079 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.22□□□□□ -0.13
CopeO89079 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.22□□□□□ -0.13
CopeO89079 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.22□□□□□ -0.13
CopeO89079 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.22□□□□□ -0.13
CopeO89079 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.22□□□□□ -0.13
CopeO89079 Gm5364-201ENSMUST00000216789 889 ntBASIC14.22□□□□□ -0.13
CopeO89079 Gm18027-201ENSMUST00000218947 619 ntBASIC14.22□□□□□ -0.13
CopeO89079 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.22□□□□□ -0.13
CopeO89079 Mzt1-203ENSMUST00000227948 952 ntBASIC14.22□□□□□ -0.13
CopeO89079 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CopeO89079 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CopeO89079 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CopeO89079 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.21□□□□□ -0.13
CopeO89079 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CopeO89079 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.21□□□□□ -0.13
CopeO89079 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms