Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.32□□□□□ -0.44
CcnkO88874 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CcnkO88874 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CcnkO88874 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CcnkO88874 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Gm11594-201ENSMUST00000122313 162 ntBASIC12.31□□□□□ -0.44
CcnkO88874 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.31□□□□□ -0.44
CcnkO88874 Gm17271-201ENSMUST00000165535 355 ntBASIC12.31□□□□□ -0.44
CcnkO88874 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
CcnkO88874 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CcnkO88874 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CcnkO88874 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CcnkO88874 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.3□□□□□ -0.44
CcnkO88874 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.3□□□□□ -0.44
CcnkO88874 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.3□□□□□ -0.44
CcnkO88874 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Gm2213-201ENSMUST00000197485 688 ntBASIC12.3□□□□□ -0.44
CcnkO88874 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CcnkO88874 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.3□□□□□ -0.44
CcnkO88874 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CcnkO88874 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
CcnkO88874 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CcnkO88874 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcnkO88874 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.29□□□□□ -0.44
CcnkO88874 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CcnkO88874 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CcnkO88874 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcnkO88874 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms