Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Alx3O70137 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.64□□□□□ -0.39
Alx3O70137 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Alx3O70137 Gm29310-201ENSMUST00000185468 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21825-201ENSMUST00000185728 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm29109-201ENSMUST00000185895 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21896-201ENSMUST00000186520 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21873-201ENSMUST00000186728 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21794-201ENSMUST00000187056 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21880-201ENSMUST00000187275 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21826-201ENSMUST00000187451 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21198-201ENSMUST00000188393 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21749-201ENSMUST00000189343 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21901-201ENSMUST00000189568 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm29424-201ENSMUST00000189716 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm28599-201ENSMUST00000189838 694 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21867-201ENSMUST00000189917 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm29269-201ENSMUST00000190087 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21722-201ENSMUST00000190153 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm28423-201ENSMUST00000190701 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21899-201ENSMUST00000190745 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21910-201ENSMUST00000191163 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21849-201ENSMUST00000191571 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm28678-201ENSMUST00000191593 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm20910-201ENSMUST00000193268 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Gm21871-201ENSMUST00000194621 696 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Alx3O70137 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Alx3O70137 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.64□□□□□ -0.39
Alx3O70137 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Alx3O70137 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Alx3O70137 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Alx3O70137 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Alx3O70137 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Alx3O70137 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Alx3O70137 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.63□□□□□ -0.39
Alx3O70137 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Alx3O70137 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.63□□□□□ -0.39
Alx3O70137 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.63□□□□□ -0.39
Alx3O70137 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Alx3O70137 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Alx3O70137 Gm25287-201ENSMUST00000103846 110 ntBASIC12.63□□□□□ -0.39
Alx3O70137 Gm22918-201ENSMUST00000103855 110 ntBASIC12.63□□□□□ -0.39
Alx3O70137 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Alx3O70137 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Mir1895-201ENSMUST00000122615 79 ntBASIC12.63□□□□□ -0.39
Alx3O70137 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Gm27494-201ENSMUST00000184735 189 ntBASIC12.63□□□□□ -0.39
Alx3O70137 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.63□□□□□ -0.39
Alx3O70137 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.63□□□□□ -0.39
Alx3O70137 Gm6443-201ENSMUST00000203599 874 ntBASIC12.63□□□□□ -0.39
Alx3O70137 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.63□□□□□ -0.39
Alx3O70137 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Alx3O70137 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Alx3O70137 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx3O70137 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx3O70137 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx3O70137 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx3O70137 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx3O70137 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms