Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.65□□□□□ -0.54
Cxcl13O55038 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cxcl13O55038 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl13O55038 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl13O55038 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.65□□□□□ -0.55
Cxcl13O55038 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.65□□□□□ -0.55
Cxcl13O55038 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl13O55038 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl13O55038 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cxcl13O55038 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.64□□□□□ -0.55
Cxcl13O55038 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Gm42550-201ENSMUST00000201553 960 ntBASIC11.64□□□□□ -0.55
Cxcl13O55038 Gm44719-201ENSMUST00000206404 149 ntBASIC11.64□□□□□ -0.55
Cxcl13O55038 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cxcl13O55038 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cxcl13O55038 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.63□□□□□ -0.55
Cxcl13O55038 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.63□□□□□ -0.55
Cxcl13O55038 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.63□□□□□ -0.55
Cxcl13O55038 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cxcl13O55038 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms