Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Efnb3O35393 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.92□□□□□ -0.66
Efnb3O35393 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Efnb3O35393 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Efnb3O35393 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm11779-201ENSMUST00000118541 368 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Efnb3O35393 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.91□□□□□ -0.66
Efnb3O35393 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Efnb3O35393 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm27920-201ENSMUST00000183953 96 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Gm27525-201ENSMUST00000184465 107 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.91□□□□□ -0.66
Efnb3O35393 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Efnb3O35393 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.91□□□□□ -0.66
Efnb3O35393 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC10.91□□□□□ -0.66
Efnb3O35393 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Efnb3O35393 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.91□□□□□ -0.66
Efnb3O35393 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Efnb3O35393 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Efnb3O35393 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Efnb3O35393 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.9□□□□□ -0.66
Efnb3O35393 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.9□□□□□ -0.66
Efnb3O35393 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.9□□□□□ -0.66
Efnb3O35393 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Mir3113-201ENSMUST00000175478 76 ntBASIC10.9□□□□□ -0.66
Efnb3O35393 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Efnb3O35393 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Efnb3O35393 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.9□□□□□ -0.66
Efnb3O35393 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Efnb3O35393 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms