Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Gm17330-201ENSMUST00000221047 165 ntBASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb9E9Q5G2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm2495-201ENSMUST00000191160 466 ntBASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb9E9Q5G2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb9E9Q5G2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.16■□□□□ 0.18
Pcdhb9E9Q5G2 Gm12403-201ENSMUST00000121384 959 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms