Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.12■□□□□ 0.17
Usp42B2RQC2 Gm15376-201ENSMUST00000122258 783 ntBASIC16.12■□□□□ 0.17
Usp42B2RQC2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Gm5866-201ENSMUST00000177881 973 ntBASIC16.12■□□□□ 0.17
Usp42B2RQC2 Gm19078-201ENSMUST00000206311 727 ntBASIC16.12■□□□□ 0.17
Usp42B2RQC2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Usp42B2RQC2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm26464-201ENSMUST00000157094 305 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.11■□□□□ 0.17
Usp42B2RQC2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Usp42B2RQC2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Gm15770-201ENSMUST00000117498 584 ntBASIC16.1■□□□□ 0.17
Usp42B2RQC2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Usp42B2RQC2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.1■□□□□ 0.17
Usp42B2RQC2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Usp42B2RQC2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms