Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-bsA8DUK4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Mir5130-201ENSMUST00000175160 84 ntBASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Gm2445-201ENSMUST00000182798 989 ntBASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Gm8520-201ENSMUST00000186517 868 ntBASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-bsA8DUK4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Mir770-201ENSMUST00000103252 94 ntBASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hbb-bsA8DUK4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hbb-bsA8DUK4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Hbb-bsA8DUK4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hbb-bsA8DUK4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hbb-bsA8DUK4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hbb-bsA8DUK4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms