Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm13464-201ENSMUST00000119418 935 ntBASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm27459-201ENSMUST00000184860 107 ntBASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm9182-201ENSMUST00000217829 639 ntBASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AV026068-213ENSMUST00000223675 1171 ntBASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms