Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm5354-201ENSMUST00000182417 973 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.28□□□□□ -0.28
Upk3aQ9JKX8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Upk3aQ9JKX8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Upk3aQ9JKX8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Upk3aQ9JKX8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms