Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ldb3Q9JKS4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ldb3Q9JKS4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm16215-201ENSMUST00000161990 637 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm18905-201ENSMUST00000205454 928 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm17795-201ENSMUST00000214505 757 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm9797-201ENSMUST00000052902 613 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ldb3Q9JKS4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm44719-201ENSMUST00000206404 149 ntBASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ldb3Q9JKS4 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms