Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ush1cQ9ES64 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ush1cQ9ES64 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ush1cQ9ES64 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
Ush1cQ9ES64 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ush1cQ9ES64 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.83■□□□□ 0.12
Ush1cQ9ES64 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Psmb5-202ENSMUST00000227257 622 ntBASIC15.83■□□□□ 0.12
Ush1cQ9ES64 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ush1cQ9ES64 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Mbnl2-204ENSMUST00000227012 2390 ntBASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ush1cQ9ES64 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ush1cQ9ES64 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms