Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-4Q9EQM3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm11618-201ENSMUST00000117946 267 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm7046-201ENSMUST00000221351 977 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-4Q9EQM3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-4Q9EQM3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-4Q9EQM3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-4Q9EQM3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms