Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Gm12260-201ENSMUST00000122447 411 ntBASIC13.1□□□□□ -0.31
Upk1aQ9D132 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.1□□□□□ -0.31
Upk1aQ9D132 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Upk1aQ9D132 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.09□□□□□ -0.31
Upk1aQ9D132 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Mir3113-201ENSMUST00000175478 76 ntBASIC13.09□□□□□ -0.31
Upk1aQ9D132 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.09□□□□□ -0.31
Upk1aQ9D132 Gm29741-201ENSMUST00000192667 421 ntBASIC13.09□□□□□ -0.31
Upk1aQ9D132 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.09□□□□□ -0.31
Upk1aQ9D132 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Upk1aQ9D132 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.08□□□□□ -0.31
Upk1aQ9D132 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk1aQ9D132 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk1aQ9D132 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Upk1aQ9D132 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk1aQ9D132 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Upk1aQ9D132 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gm11543-201ENSMUST00000120758 370 ntBASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gm44719-201ENSMUST00000206404 149 ntBASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.08□□□□□ -0.32
Upk1aQ9D132 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk1aQ9D132 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk1aQ9D132 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upk1aQ9D132 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk1aQ9D132 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms