Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Gm10819-201ENSMUST00000099988 561 ntBASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chaf1bQ9D0N7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Gm28659-201ENSMUST00000188013 759 ntBASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chaf1bQ9D0N7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Gm17971-201ENSMUST00000190239 806 ntBASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Gm7461-201ENSMUST00000058918 827 ntBASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chaf1bQ9D0N7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms