Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn1Q9CWM4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn1Q9CWM4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn1Q9CWM4 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Pfdn1Q9CWM4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Mir5130-201ENSMUST00000175160 84 ntBASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn1Q9CWM4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Mir5122-201ENSMUST00000175004 89 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Gm18622-201ENSMUST00000219361 595 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pfdn1Q9CWM4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.08□□□□□ -0.47
Pfdn1Q9CWM4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn1Q9CWM4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn1Q9CWM4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn1Q9CWM4 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pfdn1Q9CWM4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms