Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Krt88Q9CPR6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Krt88Q9CPR6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm18733-201ENSMUST00000173950 856 ntBASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Gm27920-201ENSMUST00000183953 96 ntBASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Krt88Q9CPR6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Krt88Q9CPR6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Gm15957-201ENSMUST00000118893 974 ntBASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Krt88Q9CPR6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms