Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm18734-201ENSMUST00000172937 808 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm2546-201ENSMUST00000182630 991 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm44126-201ENSMUST00000204831 514 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm44551-201ENSMUST00000208804 171 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh15Q99PJ1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Gm15547-201ENSMUST00000122152 333 ntBASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Gm17208-201ENSMUST00000168388 535 ntBASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh15Q99PJ1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gm8566-201ENSMUST00000120174 465 ntBASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gm23699-201ENSMUST00000158835 135 ntBASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gm5051-201ENSMUST00000204085 485 ntBASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh15Q99PJ1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdh15Q99PJ1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh15Q99PJ1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms