Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gm8749-201ENSMUST00000117737 331 ntBASIC12.13□□□□□ -0.47
Scrt1Q99M85 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gm37424-201ENSMUST00000191727 561 ntBASIC12.13□□□□□ -0.47
Scrt1Q99M85 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.13□□□□□ -0.47
Scrt1Q99M85 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scrt1Q99M85 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Mir1894-201ENSMUST00000122802 81 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 Gm17795-201ENSMUST00000214505 757 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.12□□□□□ -0.47
Scrt1Q99M85 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scrt1Q99M85 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm9726-201ENSMUST00000180321 678 ntBASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm9182-201ENSMUST00000217829 639 ntBASIC12.11□□□□□ -0.47
Scrt1Q99M85 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scrt1Q99M85 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 133.4 ms