Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Gm4804-201ENSMUST00000182234 999 ntBASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdha3Q91Y16 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdha3Q91Y16 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Syt7-204ENSMUST00000223586 1344 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Gm18027-201ENSMUST00000218947 619 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Rubie-203ENSMUST00000227803 2430 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdha3Q91Y16 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm21470-201ENSMUST00000187680 696 ntBASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Gm20445-201ENSMUST00000061905 565 ntBASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdha3Q91Y16 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms