Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb22Q91XZ8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gm7488-201ENSMUST00000117148 684 ntBASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb22Q91XZ8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Gm2423-201ENSMUST00000074863 733 ntBASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb22Q91XZ8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Gm5354-201ENSMUST00000182417 973 ntBASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb22Q91XZ8 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms