Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Gm37714-201ENSMUST00000194742 342 ntBASIC14.31□□□□□ -0.12
Trim60Q8VI40 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.31□□□□□ -0.12
Trim60Q8VI40 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim60Q8VI40 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.3□□□□□ -0.12
Trim60Q8VI40 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Gm5566-201ENSMUST00000116118 459 ntBASIC14.3□□□□□ -0.12
Trim60Q8VI40 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.3□□□□□ -0.12
Trim60Q8VI40 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim60Q8VI40 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Gm13015-201ENSMUST00000118674 204 ntBASIC14.29□□□□□ -0.12
Trim60Q8VI40 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Gm9719-201ENSMUST00000162765 543 ntBASIC14.29□□□□□ -0.12
Trim60Q8VI40 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.29□□□□□ -0.12
Trim60Q8VI40 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.29□□□□□ -0.12
Trim60Q8VI40 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim60Q8VI40 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.28□□□□□ -0.12
Trim60Q8VI40 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.28□□□□□ -0.12
Trim60Q8VI40 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim60Q8VI40 Gm8000-201ENSMUST00000188378 592 ntBASIC14.28□□□□□ -0.12
Trim60Q8VI40 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms