Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Gm15483-201ENSMUST00000120338 456 ntBASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc28bQ8CEG5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Gm9385-201ENSMUST00000117563 472 ntBASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc28bQ8CEG5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Gm11452-201ENSMUST00000122376 690 ntBASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Gm44608-201ENSMUST00000206827 855 ntBASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.66□□□□□ -0.22
Ccdc28bQ8CEG5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc28bQ8CEG5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms